fix spring/self command
fix ID group-ID spring/self K dir
ID, group-ID are documented in fix command
spring/self = style name of this fix command
K = spring constant (force/distance units)
dir = xyz, xy, xz, yz, x, y, or z (optional, default: xyz)
fix tether boundary-atoms spring/self 10.0 fix zrest move spring/self 10.0 z
Apply a spring force independently to each atom in the group to tether it to its initial position. The initial position for each atom is its location at the time the fix command was issued. At each timestep, the magnitude of the force on each atom is -Kr, where r is the displacement of the atom from its current position to its initial position. The distance r correctly takes into account any crossings of periodic boundary by the atom since it was in its initial position.
With the (optional) dir flag, one can select in which direction the spring force is applied. By default, the restraint is applied in all directions, but it can be limited to the xy-, xz-, yz-plane and the x-, y-, or z-direction, thus restraining the atoms to a line or a plane, respectively.
Restart, fix_modify, output, run start/stop, minimize info
This fix writes the original coordinates of tethered atoms to binary restart files, so that the spring effect will be the same in a restarted simulation. See the read_restart command for info on how to re-specify a fix in an input script that reads a restart file, so that the operation of the fix continues in an uninterrupted fashion.
The fix_modify energy option is supported by this fix to add the energy stored in the per-atom springs to the global potential energy of the system as part of thermodynamic output. The default setting for this fix is fix_modify energy no.
This fix computes a global scalar which can be accessed by various output commands. The scalar is an energy which is the sum of the spring energy for each atom, where the per-atom energy is 0.5 * K * r^2. The scalar value calculated by this fix is “extensive”.
No parameter of this fix can be used with the start/stop keywords of the run command.
The forces due to this fix are imposed during an energy minimization, invoked by the minimize command.
If you want the per-atom spring energy to be included in the total potential energy of the system (the quantity being minimized), you MUST enable the fix_modify energy option for this fix.
Styles with a gpu, intel, kk, omp, or opt suffix are functionally the same as the corresponding style without the suffix. They have been optimized to run faster, depending on your available hardware, as discussed on the Accelerator packages page. The accelerated styles take the same arguments and should produce the same results, except for round-off and precision issues.
These accelerated styles are part of the GPU, INTEL, KOKKOS, OPENMP, and OPT packages, respectively. They are only enabled if LAMMPS was built with those packages. See the Build package page for more info.
You can specify the accelerated styles explicitly in your input script by including their suffix, or you can use the -suffix command-line switch when you invoke LAMMPS, or you can use the suffix command in your input script.
See the Accelerator packages page for more instructions on how to use the accelerated styles effectively.