fix qeq/reaxff command¶
Accelerator Variants: qeq/reaxff/kk, qeq/reaxff/omp
fix ID group-ID qeq/reaxff Nevery cutlo cuthi tolerance params args
ID, group-ID are documented in fix command
qeq/reaxff = style name of this fix command
Nevery = perform QEq every this many steps
cutlo,cuthi = lo and hi cutoff for Taper radius
tolerance = precision to which charges will be equilibrated
params = reaxff or a filename
one or more keywords or keyword/value pairs may be appended
keyword = dual or maxiter or nowarn dual = process S and T matrix in parallel (only for qeq/reaxff/omp) maxiter N = limit the number of iterations to N nowarn = do not print a warning message if the maximum number of iterations was reached
fix 1 all qeq/reaxff 1 0.0 10.0 1.0e-6 reaxff fix 1 all qeq/reaxff 1 0.0 10.0 1.0e-6 param.qeq maxiter 500
Perform the charge equilibration (QEq) method as described in (Rappe and Goddard) and formulated in (Nakano). It is typically used in conjunction with the ReaxFF force field model as implemented in the pair_style reaxff command, but it can be used with any potential in LAMMPS, so long as it defines and uses charges on each atom. The fix qeq/comb command should be used to perform charge equilibration with the COMB potential. For more technical details about the charge equilibration performed by fix qeq/reaxff, see the (Aktulga) paper.
The QEq method minimizes the electrostatic energy of the system by adjusting the partial charge on individual atoms based on interactions with their neighbors. It requires some parameters for each atom type. If the params setting above is the word “reaxff”, then these are extracted from the pair_style reaxff command and the ReaxFF force field file it reads in. If a file name is specified for params, then the parameters are taken from the specified file and the file must contain one line for each atom type. The latter form must be used when performing QeQ with a non-ReaxFF potential. Each line should be formatted as follows:
itype chi eta gamma
where itype is the atom type from 1 to Ntypes, chi denotes the electronegativity in eV, eta denotes the self-Coulomb potential in eV, and gamma denotes the valence orbital exponent. Note that these 3 quantities are also in the ReaxFF potential file, except that eta is defined here as twice the eta value in the ReaxFF file. Note that unlike the rest of LAMMPS, the units of this fix are hard-coded to be A, eV, and electronic charge.
The optional dual keyword allows to perform the optimization of the S and T matrices in parallel. This is only supported for the qeq/reaxff/omp style. Otherwise they are processed separately. The qeq/reaxff/kk style always solves the S and T matrices in parallel.
The optional maxiter keyword allows changing the max number of iterations in the linear solver. The default value is 200.
The optional nowarn keyword silences the warning message printed when the maximum number of iterations was reached. This can be useful for comparing serial and parallel results where having the same fixed number of QEq iterations is desired, which can be achieved by using a very small tolerance and setting maxiter to the desired number of iterations.
In order to solve the self-consistent equations for electronegativity equalization, LAMMPS imposes the additional constraint that all the charges in the fix group must add up to zero. The initial charge assignments should also satisfy this constraint. LAMMPS will print a warning if that is not the case.
Restart, fix_modify, output, run start/stop, minimize info¶
No information about this fix is written to binary restart files. This fix computes a global scalar (the number of iterations) for access by various output commands. No parameter of this fix can be used with the start/stop keywords of the run command.
This fix is invoked during energy minimization.
Styles with a gpu, intel, kk, omp, or opt suffix are functionally the same as the corresponding style without the suffix. They have been optimized to run faster, depending on your available hardware, as discussed on the Accelerator packages page. The accelerated styles take the same arguments and should produce the same results, except for round-off and precision issues.
These accelerated styles are part of the GPU, INTEL, KOKKOS, OPENMP, and OPT packages, respectively. They are only enabled if LAMMPS was built with those packages. See the Build package page for more info.
You can specify the accelerated styles explicitly in your input script by including their suffix, or you can use the -suffix command-line switch when you invoke LAMMPS, or you can use the suffix command in your input script.
See the Accelerator packages page for more instructions on how to use the accelerated styles effectively.
This fix is part of the REAXFF package. It is only enabled if LAMMPS was built with that package. See the Build package page for more info.
This fix does not correctly handle interactions involving multiple periodic images of the same atom. Hence, it should not be used for periodic cell dimensions less than 10 Angstroms.
This fix may be used in combination with fix efield and will apply the external electric field during charge equilibration, but there may be only one fix efield instance used, it may only use a constant electric field, and the electric field vector may only have components in non-periodic directions.
(Rappe) Rappe and Goddard III, Journal of Physical Chemistry, 95, 3358-3363 (1991).
(Nakano) Nakano, Computer Physics Communications, 104, 59-69 (1997).
(Aktulga) Aktulga, Fogarty, Pandit, Grama, Parallel Computing, 38, 245-259 (2012).